Differentiation of metallicolous and non-metallicolous Salix caprea populations based on phenotypic characteristics and nuclear microsatellite (SSR) markers.
Identifieur interne : 003307 ( Main/Exploration ); précédent : 003306; suivant : 003308Differentiation of metallicolous and non-metallicolous Salix caprea populations based on phenotypic characteristics and nuclear microsatellite (SSR) markers.
Auteurs : Markus Puschenreiter ; Mine Türkta ; Peter Sommer ; Gerlinde Wieshammer ; Gregor Laaha [Autriche] ; Walter W. Wenzel ; Marie-Theres HauserSource :
- Plant, cell & environment [ 1365-3040 ] ; 2010.
Descripteurs français
- KwdFr :
- ADN des plantes (MeSH), Allèles (MeSH), Analyse de séquence d'ADN (MeSH), Biomasse (MeSH), Cadmium (métabolisme), Dépollution biologique de l'environnement (MeSH), Europe (MeSH), Feuilles de plante (MeSH), Génétique des populations (MeSH), Polluants atmosphériques (MeSH), Polluants du sol (MeSH), Populus (effets des médicaments et des substances chimiques), Populus (génétique), Populus (métabolisme), Répétitions microsatellites (MeSH), Salix (effets des médicaments et des substances chimiques), Salix (génétique), Salix (métabolisme), Variation génétique (effets des médicaments et des substances chimiques), Zinc (métabolisme).
- MESH :
- effets des médicaments et des substances chimiques : Populus, Salix, Variation génétique.
- génétique : Populus, Salix.
- métabolisme : Cadmium, Populus, Salix, Zinc.
- ADN des plantes, Allèles, Analyse de séquence d'ADN, Biomasse, Dépollution biologique de l'environnement, Europe, Feuilles de plante, Génétique des populations, Polluants atmosphériques, Polluants du sol, Répétitions microsatellites.
English descriptors
- KwdEn :
- Air Pollutants (MeSH), Alleles (MeSH), Biodegradation, Environmental (MeSH), Biomass (MeSH), Cadmium (metabolism), DNA, Plant (MeSH), Europe (MeSH), Genetic Variation (drug effects), Genetics, Population (MeSH), Microsatellite Repeats (MeSH), Plant Leaves (MeSH), Populus (drug effects), Populus (genetics), Populus (metabolism), Salix (drug effects), Salix (genetics), Salix (metabolism), Sequence Analysis, DNA (MeSH), Soil Pollutants (MeSH), Zinc (metabolism).
- MESH :
- chemical , metabolism : Cadmium, Zinc.
- chemical : Air Pollutants, DNA, Plant, Soil Pollutants.
- geographic : Europe.
- drug effects : Genetic Variation, Populus, Salix.
- genetics : Populus, Salix.
- metabolism : Populus, Salix.
- Alleles, Biodegradation, Environmental, Biomass, Genetics, Population, Microsatellite Repeats, Plant Leaves, Sequence Analysis, DNA.
Abstract
The Salicaceae family comprises a large number of high-biomass species with remarkable genetic variability and adaptation to ecological niches. Salix caprea survives in heavy metal contaminated areas, translocates and accumulates Zn/Cd in leaves. To reveal potential selective effects of long-term heavy metal contaminations on the genetic structure and Zn/Cd accumulation capacity, 170 S. caprea isolates of four metal-contaminated and three non-contaminated middle European sites were analysed with microsatellite markers using Wright's F statistics. The differentiation of populations North of the Alps are more pronounced compared to the Southern ones. By grouping the isolates based on their contamination status, a weak but significant differentiation was calculated between Northern metallicolous and non-metallicolous populations. To quantify if the contamination and genetic status of the populations correlate with Zn/Cd tolerance and the accumulation capacity, the S. caprea isolates were exposed to elevated Cd/Zn concentrations in perlite-based cultures. Consistent with the genetic data nested anova analyses for the physiological traits find a significant difference in the Cd accumulation capacity between the Northern and Southern populations. Our data suggest that natural populations are a profitable source to uncover genetic mechanisms of heavy metal accumulation and biomass production, traits that are essential for improving phytoextraction strategies.
DOI: 10.1111/j.1365-3040.2010.02170.x
PubMed: 20444221
PubMed Central: PMC4361689
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Wenzel</name><affiliation><nlm:affiliation>Institute of Soil Science, Department of Forest and Soil Sciences, BOKU-University of Natural Resources and Applied Life Sciences.</nlm:affiliation><wicri:noCountry code="subField">BOKU-University of Natural Resources and Applied Life Sciences</wicri:noCountry></affiliation></author><author><name sortKey="Hauser, Marie Theres" sort="Hauser, Marie Theres" uniqKey="Hauser M" first="Marie-Theres" last="Hauser">Marie-Theres Hauser</name><affiliation><nlm:affiliation>Department of Applied Genetics and Cell Biology, BOKU-University of Natural Resources and Applied Life Sciences.</nlm:affiliation><wicri:noCountry code="subField">BOKU-University of Natural Resources and Applied Life Sciences</wicri:noCountry></affiliation></author></analytic><series><title level="j">Plant, cell & environment</title><idno type="eISSN">1365-3040</idno><imprint><date when="2010" type="published">2010</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Air Pollutants (MeSH)</term><term>Alleles (MeSH)</term><term>Biodegradation, Environmental (MeSH)</term><term>Biomass (MeSH)</term><term>Cadmium (metabolism)</term><term>DNA, Plant (MeSH)</term><term>Europe (MeSH)</term><term>Genetic Variation (drug effects)</term><term>Genetics, Population (MeSH)</term><term>Microsatellite Repeats (MeSH)</term><term>Plant Leaves (MeSH)</term><term>Populus (drug effects)</term><term>Populus (genetics)</term><term>Populus (metabolism)</term><term>Salix (drug effects)</term><term>Salix (genetics)</term><term>Salix (metabolism)</term><term>Sequence Analysis, DNA (MeSH)</term><term>Soil Pollutants (MeSH)</term><term>Zinc (metabolism)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN des plantes (MeSH)</term><term>Allèles (MeSH)</term><term>Analyse de séquence d'ADN (MeSH)</term><term>Biomasse (MeSH)</term><term>Cadmium (métabolisme)</term><term>Dépollution biologique de l'environnement (MeSH)</term><term>Europe (MeSH)</term><term>Feuilles de plante (MeSH)</term><term>Génétique des populations (MeSH)</term><term>Polluants atmosphériques (MeSH)</term><term>Polluants du sol (MeSH)</term><term>Populus (effets des médicaments et des substances chimiques)</term><term>Populus (génétique)</term><term>Populus (métabolisme)</term><term>Répétitions microsatellites (MeSH)</term><term>Salix (effets des médicaments et des substances chimiques)</term><term>Salix (génétique)</term><term>Salix (métabolisme)</term><term>Variation génétique (effets des médicaments et des substances chimiques)</term><term>Zinc (métabolisme)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Cadmium</term><term>Zinc</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>Air Pollutants</term><term>DNA, Plant</term><term>Soil Pollutants</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Europe</term></keywords><keywords scheme="MESH" qualifier="drug effects" xml:lang="en"><term>Genetic Variation</term><term>Populus</term><term>Salix</term></keywords><keywords scheme="MESH" qualifier="effets des médicaments et des substances chimiques" xml:lang="fr"><term>Populus</term><term>Salix</term><term>Variation génétique</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Populus</term><term>Salix</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Populus</term><term>Salix</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Populus</term><term>Salix</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Cadmium</term><term>Populus</term><term>Salix</term><term>Zinc</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Alleles</term><term>Biodegradation, Environmental</term><term>Biomass</term><term>Genetics, Population</term><term>Microsatellite Repeats</term><term>Plant Leaves</term><term>Sequence Analysis, DNA</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>ADN des plantes</term><term>Allèles</term><term>Analyse de séquence d'ADN</term><term>Biomasse</term><term>Dépollution biologique de l'environnement</term><term>Europe</term><term>Feuilles de plante</term><term>Génétique des populations</term><term>Polluants atmosphériques</term><term>Polluants du sol</term><term>Répétitions microsatellites</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The Salicaceae family comprises a large number of high-biomass species with remarkable genetic variability and adaptation to ecological niches. Salix caprea survives in heavy metal contaminated areas, translocates and accumulates Zn/Cd in leaves. To reveal potential selective effects of long-term heavy metal contaminations on the genetic structure and Zn/Cd accumulation capacity, 170 S. caprea isolates of four metal-contaminated and three non-contaminated middle European sites were analysed with microsatellite markers using Wright's F statistics. The differentiation of populations North of the Alps are more pronounced compared to the Southern ones. By grouping the isolates based on their contamination status, a weak but significant differentiation was calculated between Northern metallicolous and non-metallicolous populations. To quantify if the contamination and genetic status of the populations correlate with Zn/Cd tolerance and the accumulation capacity, the S. caprea isolates were exposed to elevated Cd/Zn concentrations in perlite-based cultures. Consistent with the genetic data nested anova analyses for the physiological traits find a significant difference in the Cd accumulation capacity between the Northern and Southern populations. Our data suggest that natural populations are a profitable source to uncover genetic mechanisms of heavy metal accumulation and biomass production, traits that are essential for improving phytoextraction strategies.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">20444221</PMID><DateCompleted><Year>2011</Year><Month>03</Month><Day>02</Day></DateCompleted><DateRevised><Year>2019</Year><Month>01</Month><Day>08</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Electronic">1365-3040</ISSN><JournalIssue CitedMedium="Internet"><Volume>33</Volume><Issue>10</Issue><PubDate><Year>2010</Year><Month>Oct</Month></PubDate></JournalIssue><Title>Plant, cell & environment</Title><ISOAbbreviation>Plant Cell Environ</ISOAbbreviation></Journal><ArticleTitle>Differentiation of metallicolous and non-metallicolous Salix caprea populations based on phenotypic characteristics and nuclear microsatellite (SSR) markers.</ArticleTitle><Pagination><MedlinePgn>1641-1655</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/j.1365-3040.2010.02170.x</ELocationID><Abstract><AbstractText>The Salicaceae family comprises a large number of high-biomass species with remarkable genetic variability and adaptation to ecological niches. Salix caprea survives in heavy metal contaminated areas, translocates and accumulates Zn/Cd in leaves. To reveal potential selective effects of long-term heavy metal contaminations on the genetic structure and Zn/Cd accumulation capacity, 170 S. caprea isolates of four metal-contaminated and three non-contaminated middle European sites were analysed with microsatellite markers using Wright's F statistics. The differentiation of populations North of the Alps are more pronounced compared to the Southern ones. By grouping the isolates based on their contamination status, a weak but significant differentiation was calculated between Northern metallicolous and non-metallicolous populations. To quantify if the contamination and genetic status of the populations correlate with Zn/Cd tolerance and the accumulation capacity, the S. caprea isolates were exposed to elevated Cd/Zn concentrations in perlite-based cultures. Consistent with the genetic data nested anova analyses for the physiological traits find a significant difference in the Cd accumulation capacity between the Northern and Southern populations. Our data suggest that natural populations are a profitable source to uncover genetic mechanisms of heavy metal accumulation and biomass production, traits that are essential for improving phytoextraction strategies.</AbstractText><CopyrightInformation>© 2010 Blackwell Publishing Ltd.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y" EqualContrib="Y"><LastName>Puschenreiter</LastName><ForeName>Markus</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Institute of Soil Science, Department of Forest and Soil Sciences, BOKU-University of Natural Resources and Applied Life Sciences.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y" EqualContrib="Y"><LastName>Türktaş</LastName><ForeName>Mine</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Applied Genetics and Cell Biology, BOKU-University of Natural Resources and Applied Life Sciences.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sommer</LastName><ForeName>Peter</ForeName><Initials>P</Initials><AffiliationInfo><Affiliation>Institute of Soil Science, Department of Forest and Soil Sciences, BOKU-University of Natural Resources and Applied Life Sciences.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wieshammer</LastName><ForeName>Gerlinde</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Institute of Soil Science, Department of Forest and Soil Sciences, BOKU-University of Natural Resources and Applied Life Sciences.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Laaha</LastName><ForeName>Gregor</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Department of Landscape, Spatial and Infrastructure Sciences, University of Natural Resources and Applied Life Sciences, A-1190 Vienna, Austria.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wenzel</LastName><ForeName>Walter W</ForeName><Initials>WW</Initials><AffiliationInfo><Affiliation>Institute of Soil Science, Department of Forest and Soil Sciences, BOKU-University of Natural Resources and Applied Life Sciences.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hauser</LastName><ForeName>Marie-Theres</ForeName><Initials>MT</Initials><AffiliationInfo><Affiliation>Department of Applied Genetics and Cell Biology, BOKU-University of Natural Resources and Applied Life Sciences.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>L 433</GrantID><Agency>Austrian Science Fund FWF</Agency><Country>Austria</Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Plant Cell Environ</MedlineTA><NlmUniqueID>9309004</NlmUniqueID><ISSNLinking>0140-7791</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D000393">Air Pollutants</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D018744">DNA, Plant</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012989">Soil Pollutants</NameOfSubstance></Chemical><Chemical><RegistryNumber>00BH33GNGH</RegistryNumber><NameOfSubstance UI="D002104">Cadmium</NameOfSubstance></Chemical><Chemical><RegistryNumber>J41CSQ7QDS</RegistryNumber><NameOfSubstance UI="D015032">Zinc</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000393" MajorTopicYN="N">Air Pollutants</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D000483" MajorTopicYN="N">Alleles</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D001673" MajorTopicYN="N">Biodegradation, Environmental</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018533" MajorTopicYN="N">Biomass</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002104" MajorTopicYN="N">Cadmium</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018744" MajorTopicYN="N">DNA, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005060" MajorTopicYN="N" Type="Geographic">Europe</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014644" MajorTopicYN="N">Genetic Variation</DescriptorName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005828" MajorTopicYN="N">Genetics, Population</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018895" MajorTopicYN="Y">Microsatellite Repeats</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032108" MajorTopicYN="N">Salix</DescriptorName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012989" MajorTopicYN="N">Soil Pollutants</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D015032" MajorTopicYN="N">Zinc</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading></MeshHeadingList><OtherID Source="NLM">EMS36419</OtherID></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2010</Year><Month>5</Month><Day>7</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2010</Year><Month>5</Month><Day>7</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2011</Year><Month>3</Month><Day>3</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">20444221</ArticleId><ArticleId IdType="doi">10.1111/j.1365-3040.2010.02170.x</ArticleId><ArticleId IdType="pmc">PMC4361689</ArticleId><ArticleId 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IdType="pubmed">9807833</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Autriche</li></country></list><tree><noCountry><name sortKey="Hauser, Marie Theres" sort="Hauser, Marie Theres" uniqKey="Hauser M" first="Marie-Theres" last="Hauser">Marie-Theres Hauser</name><name sortKey="Puschenreiter, Markus" sort="Puschenreiter, Markus" uniqKey="Puschenreiter M" first="Markus" last="Puschenreiter">Markus Puschenreiter</name><name sortKey="Sommer, Peter" sort="Sommer, Peter" uniqKey="Sommer P" first="Peter" last="Sommer">Peter Sommer</name><name sortKey="Turkta, Mine" sort="Turkta, Mine" uniqKey="Turkta M" first="Mine" last="Türkta">Mine Türkta</name><name sortKey="Wenzel, Walter W" sort="Wenzel, Walter W" uniqKey="Wenzel W" first="Walter W" last="Wenzel">Walter W. Wenzel</name><name sortKey="Wieshammer, Gerlinde" sort="Wieshammer, Gerlinde" uniqKey="Wieshammer G" first="Gerlinde" last="Wieshammer">Gerlinde Wieshammer</name></noCountry><country name="Autriche"><noRegion><name sortKey="Laaha, Gregor" sort="Laaha, Gregor" uniqKey="Laaha G" first="Gregor" last="Laaha">Gregor Laaha</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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